STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
f3Coagulation factor IIIa. (285 aa)    
Predicted Functional Partners:
LOC103457846
Coagulation factor VII.
    
 0.775
tfpi2
Tissue factor pathway inhibitor.
     
 0.731
LOC103461875
Tissue factor pathway inhibitor.
     
 0.660
LOC103457832
Coagulation factor VII, like.
    
 0.649
ENSPREP00000011001
Coagulation factor IXb.
    
 0.648
f9
Coagulation factor IXa.
    
 0.648
f2
Prothrombin; Thrombin, which cleaves bonds after Arg and Lys, converts fibrinogen to fibrin and activates factors V, VII, VIII, XIII, and, in complex with thrombomodulin, protein C. Functions in blood homeostasis, inflammation and wound healing; Belongs to the peptidase S1 family.
    
 0.636
LOC103469202
Protein Z, vitamin K-dependent plasma glycoprotein a; Belongs to the peptidase S1 family.
    
 0.623
proc
Uncharacterized protein.
    
 0.623
ENSPREP00000033287
Coagulation factor VIIi; Belongs to the peptidase S1 family.
    
 0.623
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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