STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008137PDZ domain-containing protein. (288 aa)    
Predicted Functional Partners:
LOC103464946
Discs, large (Drosophila) homolog-associated protein 4b.
   
 0.757
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
 0.757
ENSPREP00000009027
Discs, large (Drosophila) homolog-associated protein 4a.
   
 0.757
DLGAP4
DLG associated protein 4.
   
 0.757
dlgap1
Discs, large (Drosophila) homolog-associated protein 1b.
   
 0.757
LOC103457360
Discs, large (Drosophila) homolog-associated protein 2b.
   
 0.757
LOC103479228
Discs, large (Drosophila) homolog-associated protein 1a.
   
 0.757
dlgap3
Discs, large (Drosophila) homolog-associated protein 3.
   
 0.757
dlgap2
Discs, large (Drosophila) homolog-associated protein 2a.
   
 0.757
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.671
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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