STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479035Protein kinase domain-containing protein. (321 aa)    
Predicted Functional Partners:
Pacrg
PARK2 co-regulated.
   
 
 0.865
LOC103465922
DUF4200 domain-containing protein.
   
 
 0.813
rsph1
Uncharacterized protein.
   
 
 0.800
LOC108166784
Sperm associated antigen 8.
   
 
 0.792
LOC103466357
DUF4201 domain-containing protein.
   
 
 0.745
ENSPREP00000005440
Cilia and flagella associated protein 100.
    
 
 0.734
snx24
Sorting nexin 24.
    
   0.728
gapvd1
GTPase activating protein and VPS9 domains 1.
    
   0.728
tekt2
Tektin 2 (testicular).
   
 
 0.727
ENSPREP00000019710
Uncharacterized protein.
   
 
 0.714
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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