STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473556Uncharacterized protein. (2297 aa)    
Predicted Functional Partners:
grip1
Glutamate receptor interacting protein 1.
    
 0.694
LOC103467517
Glutamate receptor interacting protein 2a.
    
 0.694
chsy1
Hexosyltransferase.
     
 0.501
LOC103459210
Decorin; May affect the rate of fibrils formation.
     
 0.497
chst11
Carbohydrate sulfotransferase.
    
 0.471
csgalnact2
Hexosyltransferase.
     
 0.469
fat4
FAT atypical cadherin 4.
   
  
 0.463
LOC103471165
Proteolipid protein 1a.
      
 0.463
ENSPREP00000017735
Uncharacterized protein.
   
  
 0.463
LOC103475755
Proteolipid protein 1b.
      
 0.463
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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