STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fkbp4Peptidylprolyl isomerase. (448 aa)    
Predicted Functional Partners:
stip1
Stress-induced phosphoprotein 1.
   
 0.939
LOC103471211
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
    
 0.920
NR3C1
Nuclear receptor subfamily 3 group C member 1.
    
 0.920
LOC103475709
Androgen receptor.
    
 0.887
ar
Androgen receptor.
    
 0.887
pgr
Progesterone receptor.
    
 0.882
adsl
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
 
 
 
 0.879
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
   
 0.876
LOC103457917
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
   
 0.876
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
   
 0.876
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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