STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ddx11DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11. (815 aa)    
Predicted Functional Partners:
ENSPREP00000000518
CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae).
   
 
 0.953
chtf8
CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae).
   
 
 0.945
atad5
ATPase family AAA domain containing 5a.
   
 0.938
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.934
dscc1
DNA replication and sister chromatid cohesion 1.
   
 
 0.929
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
 0.915
sympk
Symplekin.
   
   0.889
wdhd1
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.867
ENSPREP00000009685
Uncharacterized protein.
   
 
 0.855
esco2
Establishment of sister chromatid cohesion N-acetyltransferase 2.
   
 
 0.855
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.