STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008270WD_REPEATS_REGION domain-containing protein. (129 aa)    
Predicted Functional Partners:
utp18
WD_REPEATS_REGION domain-containing protein.
   
 0.999
utp6
UTP6 small subunit processome component.
   
 0.999
wdr36
WD repeat domain 36.
   
 0.999
LOC103473717
PWP2 small subunit processome component.
   
 0.998
utp4
UTP4 small subunit processome component.
   
 0.998
nol6
Nucleolar protein 6.
   
 0.996
wdr43
WD repeat domain 43.
   
 0.995
ENSPREP00000008920
Uncharacterized protein.
   
 0.995
ENSPREP00000028727
Uncharacterized protein.
   
 0.995
Wdr3
Uncharacterized protein.
   
 0.995
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.