STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adgrv1Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family. (6188 aa)    
Predicted Functional Partners:
ush2a
Usher syndrome 2A (autosomal recessive, mild).
      
 0.932
stox1
Storkhead box 1.
      
 0.901
ush1c
Usher syndrome 1C.
    
 
 0.900
TMC1
Transmembrane channel-like protein.
    
 
 0.811
rpgrip1l
RPGRIP1 like.
      
 0.804
Cdh23
Uncharacterized protein.
      
 0.758
slc26a5
Solute carrier family 26 member 5.
      
 0.758
tectb
Tectorin beta.
      
 0.730
ttc8
Tetratricopeptide repeat domain 8.
      
 0.729
LOC103475259
Clarin 1.
      
 0.729
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.