STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chchd7Coiled-coil-helix-coiled-coil-helix domain containing 7. (85 aa)    
Predicted Functional Partners:
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
      
 0.646
LOC103472833
Guanine nucleotide binding protein (G protein), beta polypeptide 3b.
      
 0.645
LOC103478033
Cytochrome c oxidase copper chaperone COX17.
   
 
 0.630
LOC103481890
Cytochrome c oxidase assembly homolog 11 (yeast).
   
  
 0.580
cmc2
COX assembly mitochondrial protein.
   
 
 0.569
LOC103479918
Cytochrome C oxidase assembly factor 5.
   
  
 0.561
gnb3
Guanine nucleotide binding protein (G protein), beta polypeptide 3a.
      
 0.560
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.536
ppp2r2d
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
      
 0.536
LOC103476923
Cytochrome c oxidase assembly homolog 15 (yeast).
      
 0.526
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.