STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rnf151Ring finger protein 151. (245 aa)    
Predicted Functional Partners:
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.668
gpatch4
G patch domain containing 4.
    
   0.660
LOC103480929
Ring finger protein 175.
      
 0.638
Birc6
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.634
zswim2
Zinc finger, SWIM-type containing 2.
    
 
 0.617
abt1
Activator of basal transcription 1.
    
   0.606
pamr1
Peptidase domain containing associated with muscle regeneration 1.
      
 0.599
ENSPREP00000005507
N(alpha)-acetyltransferase 80, NatH catalytic subunit.
      
 0.595
fam133b
Family with sequence similarity 133 member B.
    
   0.577
ecsit
ECSIT signalling integrator.
    
 0.574
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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