STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
osbpl6Oxysterol-binding protein; Belongs to the OSBP family. (804 aa)    
Predicted Functional Partners:
asb16
Ankyrin repeat and SOCS box containing 16.
    
 0.637
lrrc20
Leucine rich repeat containing 20.
      
 0.632
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 0.614
LOC103464766
Leucine rich repeat containing 38b.
      
 0.603
lrrc14b
Leucine rich repeat containing 14B.
      
 0.597
gak
Cyclin G associated kinase.
   
 
 0.596
CSRNP3
Cysteine and serine rich nuclear protein 3.
      
 0.586
LOC103474282
CSRNP_N domain-containing protein.
      
 0.586
asb8
Ankyrin repeat and SOCS box containing 8.
    
 0.551
LOC103471832
Ankyrin repeat and SOCS box containing 5a.
    
 0.525
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.