STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008295Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
spr
Sepiapterin reductase b.
     
 0.936
dhfr
Dihydrofolate reductase.
   
 
 0.929
LOC103459462
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
   
 0.920
ptges
Prostaglandin E synthase.
     
 0.918
LOC103466197
Zgc:153031.
   
 
 0.908
ptges2
Prostaglandin E synthase 2-like.
   
 
 0.907
hpgd
15-hydroxyprostaglandin dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
     
 0.906
LOC103460018
Uncharacterized protein.
     
 0.906
LOC103476570
Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.902
prxl2b
Peroxiredoxin like 2B.
     
 0.901
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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