STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476570Carbonyl reductase 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (400 aa)    
Predicted Functional Partners:
dhfr
Dihydrofolate reductase.
   
 
 0.923
spr
Sepiapterin reductase b.
     
 0.922
LOC103462617
Cytochrome P450, family 1, subfamily A; Belongs to the cytochrome P450 family.
   
 
 0.917
LOC103466197
Zgc:153031.
   
 
 0.915
LOC103459462
Aldo-keto reductase family 1, member B1 (aldose reductase), tandem duplicate 2.
   
 
 0.914
ptges
Prostaglandin E synthase.
     
 0.913
ptges2
Prostaglandin E synthase 2-like.
     
 0.907
ENSPREP00000008295
Uncharacterized protein.
  
  
 
0.902
prxl2b
Peroxiredoxin like 2B.
     
  0.900
LOC103462689
UDPGT domain-containing protein; Belongs to the UDP-glycosyltransferase family.
    
 0.665
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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