STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008370Uncharacterized protein. (175 aa)    
Predicted Functional Partners:
pet100
Uncharacterized protein.
      
 0.758
tmem38a
Transmembrane protein 38A.
    
   0.656
atxn1l
Ataxin 1-like.
   
  
 0.652
kiss1r
KISS1 receptor a.
     
 0.612
mrpl52
Mitochondrial ribosomal protein L52.
      
 0.597
LOC103456982
SH2 domain-containing protein.
      
 0.592
LOC103464815
Si:dkey-43k4.5; Belongs to the potassium channel family.
      
 0.590
ENSPREP00000019710
Uncharacterized protein.
   
 
 0.565
ENSPREP00000027150
Uncharacterized protein.
    
 0.529
gnat1
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 0.514
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.