Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rpl3lRibosomal protein L3 like. (241 aa)    
Predicted Functional Partners:
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
  
 0.997
rpl8
Ribosomal protein L8.
  
 0.997
rpl30
Ribosomal protein L30.
   
 0.997
rplp0
Ribosomal protein, large, P0.
  
 0.996
rpl10
Ribosomal protein L10.
  
 0.996
rpl9
Ribosomal protein L9.
  
 0.996
rps9
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 
 0.996
Rpl31
Ribosomal protein L31.
   
 0.996
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.996
rpl32
Ribosomal protein L32.
  
 0.996
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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