STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103464463Coiled-coil domain containing 114. (569 aa)    
Predicted Functional Partners:
armc4
Armadillo repeat containing 4.
   
 
 0.958
efcab1
Uncharacterized protein.
    
 
 0.956
ccdc151
Uncharacterized protein.
  
 0.948
ttc25
Tetratricopeptide repeat domain 25.
   
 
 0.945
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 
 0.886
dnali1
Dynein, axonemal, light intermediate chain 1.
   
 
 0.880
ENSPREP00000009737
Uncharacterized protein.
   
 
 0.877
ENSPREP00000019710
Uncharacterized protein.
   
 
 0.876
mns1
Meiosis-specific nuclear structural 1.
    
 
 0.870
nme7
Nucleoside diphosphate kinase 7; Belongs to the NDK family.
    
 
 0.867
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (38%) [HD]