STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473559Progestin and adipoQ receptor family member IIIb. (315 aa)    
Predicted Functional Partners:
appl1
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1.
    
 
 0.681
appl2
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
    
 
 0.681
clg4h19orf25
Si:ch73-238c9.1.
      
 0.601
raf1
Raf-1 proto-oncogene, serine/threonine kinase a.
    
  0.583
ddb2
Damage-specific DNA binding protein 2.
    
 
 0.583
braf
B-Raf proto-oncogene, serine/threonine kinase.
    
  0.583
LOC103469576
A-Raf proto-oncogene, serine/threonine kinase.
    
  0.583
emc6
ER membrane protein complex subunit 6.
    
 
 0.558
LOC103476580
Dual specificity phosphatase 19b.
      
 0.545
dusp19
Dual specificity phosphatase 19a.
      
 0.545
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.