STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008408Uncharacterized protein. (174 aa)    
Predicted Functional Partners:
rbbp5
Retinoblastoma binding protein 5.
    
 0.652
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.629
LOC103475867
Lysine (K)-specific demethylase 6B, b.
   
 0.456
LOC103475798
Lysine (K)-specific demethylase 6A, like.
   
 0.456
kdm6b
Lysine (K)-specific demethylase 6B, a.
   
 0.456
kdm6a
Lysine (K)-specific demethylase 6A.
   
 0.456
eed
Embryonic ectoderm development.
   
 0.454
LOC103464091
CREB binding protein a.
   
  0.438
crebbp
CREB binding protein b.
   
  0.438
LOC103468460
E1A binding protein p300 b.
   
  0.438
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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