STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008425Uncharacterized protein. (95 aa)    
Predicted Functional Partners:
txnrd2
Thioredoxin reductase 2, tandem duplicate 1.
  
  
 0.812
selenok
Selenoprotein K.
      
 0.803
selenof
Selenoprotein F.
      
 0.789
selenoo
Selenoprotein O1.
     
 0.778
selenos
Selenoprotein S.
      
 0.767
LOC103465416
Thioredoxin reductase 3.
  
  
 0.693
msra
Methionine sulfoxide reductase A.
  
 
 0.674
LOC103458858
Si:ch1073-358c10.1.
  
 
 0.674
selenop
SelP_N domain-containing protein.
      
 0.671
selenon
Selenoprotein N.
      
 0.659
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.