STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008436TSP C-terminal domain-containing protein. (491 aa)    
Predicted Functional Partners:
itgb1
Integrin beta; Belongs to the integrin beta chain family.
     
  0.900
LOC103481979
Integrin, alpha 3b; Belongs to the integrin alpha chain family.
     
  0.900
LOC103464268
Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family.
     
  0.900
LOC103459298
CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.
     
  0.900
itga1
Integrin, alpha 1; Belongs to the integrin alpha chain family.
     
  0.650
itgb8
Integrin beta; Belongs to the integrin beta chain family.
     
  0.650
itga4
Integrin alpha 4; Belongs to the integrin alpha chain family.
     
  0.650
itga6
Integrin, alpha 6a; Belongs to the integrin alpha chain family.
     
  0.650
LOC103465763
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
     
  0.650
itga11
Integrin, alpha 11a; Belongs to the integrin alpha chain family.
     
  0.650
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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