STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
scribScribble planar cell polarity protein. (1718 aa)    
Predicted Functional Partners:
PUF60
Poly-U binding splicing factor b.
   
 
 0.841
pim3
Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily.
    
 0.838
cpeb1
Cytoplasmic polyadenylation element binding protein 1b.
      
 0.795
LOC103463292
Usher syndrome 1C binding protein 1.
    
 
 0.782
bicc1
BicC family RNA binding protein 1a.
      
 0.770
efnb1
Ephrin-B1; Belongs to the ephrin family.
   
  
 0.742
trim71
Tripartite motif containing 71, E3 ubiquitin protein ligase.
    
 0.736
cenpj
Centromere protein J.
    
 0.732
VANGL1
Vang-like protein.
   
 0.729
VANGL2
VANGL planar cell polarity protein 2.
   
 0.723
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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