Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
tas1r3Taste receptor, type 1, member 3. (861 aa)    
Predicted Functional Partners:
LOC103467976
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
 
 0.889
tas1r1
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
 
 0.650
LOC103467978
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
 
 0.650
LOC103467977
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
 
 0.650
trpm5
Transient receptor potential cation channel, subfamily M, member 5.
      
 0.570
ENSPREP00000014094
NDK domain-containing protein.
    
   0.524
trpa1
Transient receptor potential cation channel, subfamily A, member 1b; Belongs to the transient receptor (TC 1.A.4) family.
   
 
 0.488
vps13d
Vacuolar protein sorting 13 homolog D.
      
 0.486
LOC103466076
Uncharacterized protein.
    
 0.459
LOC103459297
Uncharacterized protein.
    
 0.459
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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