STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008454C2 domain-containing protein. (216 aa)    
Predicted Functional Partners:
LOC103472577
Uncharacterized protein.
    
 0.996
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.996
UNC13C
Unc-13 homolog C.
 
      0.898
Unc13b
Uncharacterized protein.
 
      0.894
LOC103474031
G_PROTEIN_RECEP_F1_2 domain-containing protein.
   
  
 0.681
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 
 0.664
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 
 0.664
rims1
Regulating synaptic membrane exocytosis 1a.
    
 0.636
LOC103472178
Regulating synaptic membrane exocytosis 3.
    
 0.636
snap25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.634
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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