STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stoml2Stomatin (EPB72)-like 2. (351 aa)    
Predicted Functional Partners:
phb
Prohibitin.
   
 
 0.844
yme1l1
YME1-like 1a; Belongs to the AAA ATPase family.
   
 0.768
LOC103478959
YME1-like 1b.
   
 0.768
ENSPREP00000006614
Prohibitin.
   
 
 0.735
phb2
Prohibitin.
   
 
 0.735
parl
Rhomboid domain-containing protein.
   
 0.715
LOC103479407
Presenilin associated, rhomboid-like a.
   
 0.715
mrps7
Mitochondrial ribosomal protein S7.
   
 
 0.692
tufm
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.635
spg7
SPG7 matrix AAA peptidase subunit, paraplegin.
   
 0.624
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.