STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476625Cytochrome c oxidase assembly factor COX20. (128 aa)    
Predicted Functional Partners:
LOC103464592
Ubiquinol-cytochrome c reductase complex assembly factor 2.
   
 
 0.968
Clg19h16orf91
Si:ch211-231f6.6.
    
 
 0.925
LOC103471791
Cytochrome c oxidase assembly factor COX18.
     
 0.792
tmem177
Transmembrane protein 177.
     
 0.760
LOC103481666
Cytochrome C oxidase assembly factor 3a.
   
 
 0.581
LOC103464663
Cytochrome c oxidase assembly factor COX14.
     
 0.557
cmc1
COX assembly mitochondrial protein.
     
 0.518
surf1
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
     
 0.515
fam83a
FAM83 domain-containing protein.
    
 
 0.509
LOC103464266
Ubiquinol-cytochrome c reductase complex assembly factor 1.
    
 
 0.509
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.