STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pigoPhosphatidylinositol glycan anchor biosynthesis, class O. (1097 aa)    
Predicted Functional Partners:
pigf
Phosphatidylinositol glycan anchor biosynthesis, class F.
    
 0.987
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
    
 0.967
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
   
 0.964
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
    
 0.962
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
   
 0.959
pigs
Phosphatidylinositol glycan anchor biosynthesis, class S.
   
 0.956
pigv
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
   
 
 0.678
pigp
Phosphatidylinositol glycan anchor biosynthesis, class P.
   
  
 0.664
pigb
Mannosyltransferase.
    
 
 0.650
pigl
Phosphatidylinositol glycan anchor biosynthesis, class L.
      
 0.648
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.