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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477800Thyroid hormone receptor associated protein 3a. (907 aa)    
Predicted Functional Partners:
mettl8
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.550
mettl6
Methyltransferase-like protein; Belongs to the methyltransferase superfamily. METL family.
      
 0.550
atrx
ATRX chromatin remodeler.
   
 0.465
wdr18
WD repeat domain 18.
   
 0.460
scaf11
RING-type domain-containing protein.
  
    0.450
prpf40a
PRP40 pre-mRNA processing factor 40 homolog A.
   
 0.434
ENSPREP00000030706
Uncharacterized protein.
  
  0.425
tex10
Testis expressed 10.
   
 0.415
ENSPREP00000020228
Thyroid hormone receptor beta.
    
 
 0.407
pnn
Pinin, desmosome associated protein.
   
 
 0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.