STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Znf346Zinc finger protein 346. (277 aa)    
Predicted Functional Partners:
ilf3
Interleukin enhancer binding factor 3b.
    
 
 0.899
LOC103477270
Uncharacterized protein.
    
 
 0.742
ENSPREP00000011628
Uncharacterized protein.
    
 
 0.742
LOC103477355
Protein kinase domain-containing protein.
    
 
 0.742
ccdc124
Coiled-coil domain containing 124.
    
   0.581
ebna1bp2
EBNA1 binding protein 2.
    
   0.581
prkra
Protein kinase, interferon-inducible double stranded RNA dependent activator.
    
   0.564
tarbp2
RISC-loading complex subunit TARBP2; Required for formation of the RNA induced silencing complex (RISC). Component of the RISC loading complex (RLC), also known as the micro-RNA (miRNA) loading complex (miRLC), which is composed of DICER1, AGO2 and TARBP2. Within the RLC/miRLC, DICER1 and TARBP2 are required to process precursor miRNAs (pre-miRNAs) to mature miRNAs and then load them onto AGO2. AGO2 bound to the mature miRNA constitutes the minimal RISC and may subsequently dissociate from DICER1 and TARBP2. May also play a role in the production of short interfering RNAs (siRNAs) from [...]
    
   0.564
eif2ak3
Eukaryotic translation initiation factor 2-alpha kinase 3.
    
 
 0.525
LOC103470872
Ribosomal protein L26.
    
   0.512
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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