STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nfycNuclear transcription factor Y, gamma. (333 aa)    
Predicted Functional Partners:
nfya
Nuclear transcription factor Y, alpha, like.
    
 0.999
NFYB
Nuclear transcription factor Y, beta a.
   
 0.993
NFYB-2
Nuclear transcription factor Y subunit beta.
   
 0.993
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.938
LOC103478537
Uncharacterized protein.
    
   0.904
LOC103478535
Paraoxonase 1.
    
   0.897
Taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.735
smarca5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 
 0.675
sae1
SUMO1 activating enzyme subunit 1.
   
   0.674
chd1l
Chromodomain helicase DNA binding protein 1-like.
   
 
 0.662
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (28%) [HD]