STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfycNuclear transcription factor Y, gamma. (333 aa)    
Predicted Functional Partners:
nfya
Nuclear transcription factor Y, alpha, like.
    
 0.997
NFYB
Nuclear transcription factor Y, beta a.
   
 0.978
NFYB-2
Nuclear transcription factor Y subunit beta.
   
 0.978
pole3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
    
 0.962
GATA2
GATA binding protein 2.
   
 
 0.623
LOC103465060
GATA binding protein 2a.
   
 
 0.623
gata3
GATA binding protein 3.
   
 
 0.623
mnat1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
     
 0.596
Taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 
 0.591
med6
Mediator complex subunit 6.
   
  
 0.570
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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