Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108166075Uncharacterized protein. (648 aa)    
Predicted Functional Partners:
apaf1
Apoptotic peptidase activating factor 1.
   
 0.763
incenp
Uncharacterized protein.
   
 0.715
aurka
Aurora kinase A; Belongs to the protein kinase superfamily.
   
 0.695
LOC103471497
Aurora kinase B; Belongs to the protein kinase superfamily.
   
 0.695
cdca8
Cell division cycle associated 8.
   
 0.655
atp5f1b
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.655
ENSPREP00000017673
ANK_REP_REGION domain-containing protein.
   
 
 0.592
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 
 0.584
tep1
Uncharacterized protein.
   
 0.562
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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