ENSPREP00000008529 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000008529

Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family. (368 aa)

Predicted Functional Partners:

GNAS

0.927

LOC103464384

0.927

ENSPREP00000015338

0.747

gnal

0.747

aif1l

0.414

LOC103464516

0.405

LOC103462170

0.405

gnb1

0.405

gnb3

0.405

gnb5

0.405

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000008529	ENSPREP00000015338	ENSPREP00000008529	ENSPREP00000015338	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	Uncharacterized protein.	0.747
ENSPREP00000008529	GNAS	ENSPREP00000008529	ENSPREP00000001796	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	GNAS complex locus.	0.927
ENSPREP00000008529	LOC103462170	ENSPREP00000008529	ENSPREP00000007905	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), beta 5b.	0.405
ENSPREP00000008529	LOC103464384	ENSPREP00000008529	ENSPREP00000013143	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	GNAS complex locus.	0.927
ENSPREP00000008529	LOC103464516	ENSPREP00000008529	ENSPREP00000006363	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.405
ENSPREP00000008529	aif1l	ENSPREP00000008529	ENSPREP00000032076	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	Allograft inflammatory factor 1-like.	0.414
ENSPREP00000008529	gnal	ENSPREP00000008529	ENSPREP00000026211	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	G protein subunit alpha L.	0.747
ENSPREP00000008529	gnb1	ENSPREP00000008529	ENSPREP00000015702	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.405
ENSPREP00000008529	gnb3	ENSPREP00000008529	ENSPREP00000018400	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), beta polypeptide 3a.	0.405
ENSPREP00000008529	gnb5	ENSPREP00000008529	ENSPREP00000021759	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	Guanine nucleotide binding protein (G protein), beta 5a.	0.405
ENSPREP00000015338	ENSPREP00000008529	ENSPREP00000015338	ENSPREP00000008529	Uncharacterized protein.	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	0.747
ENSPREP00000015338	GNAS	ENSPREP00000015338	ENSPREP00000001796	Uncharacterized protein.	GNAS complex locus.	0.545
ENSPREP00000015338	LOC103462170	ENSPREP00000015338	ENSPREP00000007905	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), beta 5b.	0.598
ENSPREP00000015338	LOC103464384	ENSPREP00000015338	ENSPREP00000013143	Uncharacterized protein.	GNAS complex locus.	0.556
ENSPREP00000015338	LOC103464516	ENSPREP00000015338	ENSPREP00000006363	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), beta polypeptide 1b.	0.710
ENSPREP00000015338	gnal	ENSPREP00000015338	ENSPREP00000026211	Uncharacterized protein.	G protein subunit alpha L.	0.545
ENSPREP00000015338	gnb1	ENSPREP00000015338	ENSPREP00000015702	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), beta polypeptide 1a.	0.710
ENSPREP00000015338	gnb3	ENSPREP00000015338	ENSPREP00000018400	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), beta polypeptide 3a.	0.598
ENSPREP00000015338	gnb5	ENSPREP00000015338	ENSPREP00000021759	Uncharacterized protein.	Guanine nucleotide binding protein (G protein), beta 5a.	0.598
GNAS	ENSPREP00000008529	ENSPREP00000001796	ENSPREP00000008529	GNAS complex locus.	Si:dkey-247m21.3; Belongs to the G-protein coupled receptor 1 family.	0.927