STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480938Amino_oxidase domain-containing protein. (564 aa)    
Predicted Functional Partners:
glyr1
Glyoxylate reductase 1 homolog (Arabidopsis).
    
 
 0.881
rcor2
REST corepressor 2.
   
 0.731
rcor1
REST corepressor 1.
   
 0.731
rcor3
REST corepressor 3.
   
 0.731
Arid4a
Tudor domain-containing protein.
   
 
 0.673
arid4b
Translocase of outer mitochondrial membrane 20.
   
 
 0.673
ndufaf6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
   
 
 0.614
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
 
 0.614
wdr73
WD repeat domain 73.
   
 0.553
rbbp4
Retinoblastoma binding protein 4.
   
 0.553
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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