STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480938Amino_oxidase domain-containing protein. (564 aa)    
Predicted Functional Partners:
nit2
Nitrilase family, member 2.
    
 0.930
tdo2
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
   
 
 0.913
aoc1
Amine oxidase.
   
 
 0.913
ddo
Zgc:172341.
  
 
 0.912
LOC103470503
Indoleamine 2,3-dioxygenase 1.
     
 0.910
LOC103476765
Uncharacterized protein.
     
 0.910
LOC103476059
4-hydroxyphenylpyruvate dioxygenase.
     
 0.909
LOC103470603
4-hydroxyphenylpyruvate dioxygenase b.
     
 0.909
TYR
Tyrosinase.
    
  0.907
tyr
Tyrosinase.
    
  0.907
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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