STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473563Uncharacterized protein; Belongs to the cytochrome P450 family. (423 aa)    
Predicted Functional Partners:
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
 0.608
lss
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 0.568
sqle
Squalene epoxidase a.
   
 0.515
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.505
slirp
SRA stem-loop interacting RNA binding protein.
    
 
 0.472
LOC103457335
Uncharacterized protein.
      
 0.460
ppp2r3c
Protein phosphatase 2, regulatory subunit B'', gamma.
      
 0.459
LOC103457594
Uncharacterized protein.
    
 0.425
kmo
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid.
   
 0.420
Suox
Sulfite oxidase.
      
 0.420
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.