STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008570ERH mRNA splicing and mitosis factor. (99 aa)    
Predicted Functional Partners:
poldip3
Polymerase (DNA-directed), delta interacting protein 3.
   
 
 0.952
chtop
Chromatin target of PRMT1a.
   
 
 0.952
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
   
   0.871
snrpg
Small nuclear ribonucleoprotein G.
   
    0.857
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
    0.855
LOC103463535
Scaffold attachment factor B.
   
 
 0.843
snrpd1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
  
 0.838
magoh
Mago homolog, exon junction complex subunit.
   
   0.835
ciz1
Cdkn1a interacting zinc finger protein 1a.
    
 
 0.831
snrpd3
Small nuclear ribonucleoprotein Sm D3.
   
 
 0.828
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.