STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103468130Cytochrome b561. (252 aa)    
Predicted Functional Partners:
LOC103460434
Uncharacterized protein.
      
 0.821
pam
Peptidylglycine alpha-amidating monooxygenase.
      
 0.656
LOC103465104
Cytochrome b561 family, member D2.
      
 0.601
ciao2a
Cytosolic iron-sulfur assembly component 2A.
      
 0.594
nus1
NUS1 dehydrodolichyl diphosphate synthase subunit.
      
 0.590
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
      
 0.578
pkdcc
Protein kinase domain containing, cytoplasmic b.
      
 0.572
cdyl
Chromodomain protein, Y-like.
    
   0.564
CDYL2
Chromodomain Y like 2.
    
   0.564
gatad1
GATA zinc finger domain containing 1.
      
 0.537
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.