STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008580PDZ domain-containing protein. (1306 aa)    
Predicted Functional Partners:
LOC103472693
Protein S100; Belongs to the S-100 family.
   
 0.660
MSL3
MSL complex subunit 3.
    
 0.550
egr2
Early growth response protein 2; Sequence-specific DNA-binding transcription factor. Binds to two specific DNA sites located in the promoter region of HOXA4; Belongs to the EGR C2H2-type zinc-finger protein family.
    
 0.538
msl2
MSL complex subunit 2.
    
 0.496
MSL2
MSL complex subunit 2.
    
 0.496
nudcd1
NudC domain containing 1.
    
   0.473
rhbdd1
Rhomboid domain containing 1.
    
 
 0.458
LOC103460401
Uncharacterized protein.
   
 0.433
Brd3
Bromo domain-containing protein.
   
 0.433
rsu1
Ras suppressor protein 1.
    
 0.413
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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