STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466954Uncharacterized protein. (2543 aa)    
Predicted Functional Partners:
ENSPREP00000019402
Protein kinase domain-containing protein.
    
 0.908
map2k4
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
    
 0.908
flnb
Filamin B.
  
  
 
0.901
ENSPREP00000006052
Calponin-homology (CH) domain-containing protein.
     
 
0.900
itgb1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.831
LOC103479472
Integrin beta; Belongs to the integrin beta chain family.
    
 0.827
itgb6
Integrin beta; Belongs to the integrin beta chain family.
    
 0.790
itgb8
Integrin beta; Belongs to the integrin beta chain family.
    
 0.788
itgb5
Integrin beta; Belongs to the integrin beta chain family.
   
 0.781
LOC103469372
Integrin beta; Belongs to the integrin beta chain family.
   
 0.776
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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