STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000008631Sodium leak channel, non-selective. (578 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
   
 0.994
LOC103479055
Sodium leak channel, non-selective.
 
     0.946
ENSPREP00000024561
Unc-80 homolog (C. elegans).
   
 0.924
Unc80
UNC80 domain-containing protein.
   
 0.924
LOC103476498
Family with sequence similarity 155 member A.
   
 
 0.762
FAM155A
Family with sequence similarity 155 member A.
   
 
 0.762
wdr35
WD repeat-containing protein 35.
    
 0.661
IFT122
Intraflagellar transport 122.
   
 0.651
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.636
wdr19
WD repeat domain 19.
    
 0.630
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.