STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRFSerum response factor. (243 aa)    
Predicted Functional Partners:
LOC103465438
ETS transcription factor ELK4.
    
 0.988
Elk1
ETS domain-containing protein.
    
 0.954
myocd
SAP domain-containing protein.
    
 0.851
ENSPREP00000011559
Uncharacterized protein.
    
 0.809
LOC103468559
Myocardin related transcription factor Aa.
    
 0.809
mrtfb
Myocardin related transcription factor Ba.
    
 0.799
LOC103482013
Myocardin related transcription factor Ab.
    
 0.799
ENSPREP00000011574
Phosphatase and actin regulator.
    
 0.735
LOC103481612
ADP-ribosylation factor 2b.
    
 0.621
LOC103468661
Mitogen-activated protein kinase kinase kinase 14a.
    
 0.621
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.