STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
klf9Kruppel-like factor 9. (219 aa)    
Predicted Functional Partners:
LOC103476842
Stearoyl-CoA desaturase b; Belongs to the fatty acid desaturase type 1 family.
     
 0.555
TMEM38B
Transmembrane protein 38B.
      
 0.474
STEAP3
STEAP family member 3, metalloreductase.
      
 0.473
LOC103462700
SIN3 transcription regulator family member Ab.
    
 
 0.400
sin3a
SIN3 transcription regulator family member Aa.
    
 
 0.400
sin3b
SIN3 transcription regulator family member B.
    
 
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.