STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgk1Phosphoglycerate kinase. (417 aa)    
Predicted Functional Partners:
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.998
gapdhs
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.998
LOC103472835
Triosephosphate isomerase.
 
 0.996
Tpi1
Triosephosphate isomerase.
 
 0.996
LOC103472843
Glyceraldehyde-3-phosphate dehydrogenase.
 
 0.994
LOC103465753
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.984
LOC103473575
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.984
bpgm
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.984
pgam1
Uncharacterized protein.
   
 0.984
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
  
 
 0.982
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.