STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103471134AA_permease_C domain-containing protein. (610 aa)    
Predicted Functional Partners:
elf4
E74-like ETS transcription factor 1.
      
 0.475
slc3a1
Solute carrier family 3 member 1.
   
 0.454
ENSPREP00000006896
2-epi-5-epi-valiolone synthase.
  
 0.435
LOC103458108
Solute carrier family 3 member 2b.
   
 0.421
slc3a2
Aamy domain-containing protein.
   
 0.421
LOC103474630
Si:dkey-202g17.3.
   
 0.421
alkbh3
AlkB homolog 3, alpha-ketoglutarate-dependent dioxygenase.
   
 0.403
kiaa0513
Zgc:91860.
   
 0.403
alkbh2
AlkB homolog 2, alpha-ketoglutarate-dependent dioxygenase.
   
 0.403
adar
Adenosine deaminase RNA specific.
   
  
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.