NCBP1 protein (Poecilia reticulata) - STRING interaction network

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Predicted Interactions

gene neighborhood

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Score

NCBP1

Nuclear cap binding protein subunit 1. (797 aa)

Predicted Functional Partners:

ncbp2

0.999

Snrpd2

0.987

ENSPREP00000020943

0.980

srrt

0.980

nelfe

0.979

snrpe

0.978

cdc40

0.976

thoc2

0.975

snrpd3

0.973

snrpd1

0.970

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPREP00000020943	NCBP1	ENSPREP00000020943	ENSPREP00000008871	ARS2 domain-containing protein.	Nuclear cap binding protein subunit 1.	0.980
ENSPREP00000020943	Snrpd2	ENSPREP00000020943	ENSPREP00000005996	ARS2 domain-containing protein.	Small nuclear ribonucleoprotein Sm D2.	0.418
ENSPREP00000020943	ncbp2	ENSPREP00000020943	ENSPREP00000031952	ARS2 domain-containing protein.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.974
NCBP1	ENSPREP00000020943	ENSPREP00000008871	ENSPREP00000020943	Nuclear cap binding protein subunit 1.	ARS2 domain-containing protein.	0.980
NCBP1	Snrpd2	ENSPREP00000008871	ENSPREP00000005996	Nuclear cap binding protein subunit 1.	Small nuclear ribonucleoprotein Sm D2.	0.987
NCBP1	cdc40	ENSPREP00000008871	ENSPREP00000003161	Nuclear cap binding protein subunit 1.	Cell division cycle 40 homolog (S. cerevisiae).	0.976
NCBP1	ncbp2	ENSPREP00000008871	ENSPREP00000031952	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	nelfe	ENSPREP00000008871	ENSPREP00000003241	Nuclear cap binding protein subunit 1.	Negative elongation factor complex member E.	0.979
NCBP1	snrpd1	ENSPREP00000008871	ENSPREP00000010388	Nuclear cap binding protein subunit 1.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.970
NCBP1	snrpd3	ENSPREP00000008871	ENSPREP00000011038	Nuclear cap binding protein subunit 1.	Small nuclear ribonucleoprotein Sm D3.	0.973
NCBP1	snrpe	ENSPREP00000008871	ENSPREP00000026678	Nuclear cap binding protein subunit 1.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.978
NCBP1	srrt	ENSPREP00000008871	ENSPREP00000032916	Nuclear cap binding protein subunit 1.	Serrate RNA effector molecule homolog (Arabidopsis).	0.980
NCBP1	thoc2	ENSPREP00000008871	ENSPREP00000032098	Nuclear cap binding protein subunit 1.	THO complex 2.	0.975
Snrpd2	ENSPREP00000020943	ENSPREP00000005996	ENSPREP00000020943	Small nuclear ribonucleoprotein Sm D2.	ARS2 domain-containing protein.	0.418
Snrpd2	NCBP1	ENSPREP00000005996	ENSPREP00000008871	Small nuclear ribonucleoprotein Sm D2.	Nuclear cap binding protein subunit 1.	0.987
Snrpd2	cdc40	ENSPREP00000005996	ENSPREP00000003161	Small nuclear ribonucleoprotein Sm D2.	Cell division cycle 40 homolog (S. cerevisiae).	0.980
Snrpd2	ncbp2	ENSPREP00000005996	ENSPREP00000031952	Small nuclear ribonucleoprotein Sm D2.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.993
Snrpd2	nelfe	ENSPREP00000005996	ENSPREP00000003241	Small nuclear ribonucleoprotein Sm D2.	Negative elongation factor complex member E.	0.511
Snrpd2	snrpd1	ENSPREP00000005996	ENSPREP00000010388	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.999
Snrpd2	snrpd3	ENSPREP00000005996	ENSPREP00000011038	Small nuclear ribonucleoprotein Sm D2.	Small nuclear ribonucleoprotein Sm D3.	0.999