STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479060Zgc:66475. (506 aa)    
Predicted Functional Partners:
timeless
Timeless circadian clock.
    
 0.724
LOC103480497
Period circadian clock 1b.
   
 0.715
LOC103479643
Period circadian clock 2.
   
 0.605
PER2
Period circadian regulator 2.
   
 0.605
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.604
LOC103466090
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.604
per3
Period circadian clock 3.
   
 0.602
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.582
LOC103466760
Cryptochrome circadian regulator 2.
      
 0.550
snu13
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
    0.499
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.