STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anxa6Annexin. (665 aa)    
Predicted Functional Partners:
LOC103466590
Annexin.
  
0.513
LOC103460119
Annexin.
  
0.507
anxa1
Annexin.
  
0.507
LOC103482207
C2 domain-containing protein.
   
 0.496
dysf
Dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive).
   
 0.496
myof
Myoferlin like.
   
 0.496
LOC103482105
Uncharacterized protein.
   
 0.496
LOC103459397
Tyrosine hydroxylase 2.
      
 0.448
Cav1
Uncharacterized protein.
   
 
 0.445
LOC103477641
Cathepsin S, ortholog2, tandem duplicate 1; Belongs to the peptidase C1 family.
   
 0.439
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.