STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppm1eProtein phosphatase, Mg2+/Mn2+ dependent, 1E. (609 aa)    
Predicted Functional Partners:
fem1b
Fem-1 homolog b (C. elegans).
   
 
 0.603
ENSPREP00000019281
ANK_REP_REGION domain-containing protein.
   
 
 0.603
fem1c
Fem-1 homolog c (C. elegans).
   
 
 0.603
LOC103463153
Si:ch73-60h1.1; Belongs to the protein kinase superfamily.
    
 0.589
cul2
Cullin 2; Belongs to the cullin family.
      
 0.577
ccdc92
Coiled-coil domain containing 92.
      
 0.532
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
  
 0.526
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.508
pim1
Serine/threonine-protein kinase; Proto-oncogene with serine/threonine kinase activity involved in cell survival and cell proliferation. Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family. PIM subfamily.
   
 0.505
LOC103469848
Protein kinase domain-containing protein.
    
 0.491
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.