STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479061Neuromedin U receptor 1b; Belongs to the G-protein coupled receptor 1 family. (417 aa)    
Predicted Functional Partners:
ENSPREP00000030035
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
0.934
nmu
NMU domain-containing protein.
    
 0.925
LOC103464763
Neuromedin U receptor 3; Belongs to the G-protein coupled receptor 1 family.
  
  
 
0.909
LOC103474132
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
  0.900
nts
Neurotensin.
    
 0.688
edn1
Endothelin 1.
    
 0.583
LOC103475296
Somatostatin.
    
 0.579
LOC103465492
Uncharacterized protein.
    
  0.567
penk
Uncharacterized protein.
    
 0.561
gal
Galanin/GMAP prepropeptide.
    
 0.542
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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