STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chpf2Hexosyltransferase. (763 aa)    
Predicted Functional Partners:
chsy1
Hexosyltransferase.
    
0.939
csgalnact2
Hexosyltransferase.
    
0.925
csgalnact1
Hexosyltransferase.
    
0.925
LOC103470100
Hexosyltransferase.
    
0.925
chpf
Hexosyltransferase.
  
  
 
0.901
ENSPREP00000002283
Uncharacterized protein.
   
    0.520
LOC103463363
Hexosyltransferase.
      
 0.477
man2c1
Mannosidase, alpha, class 2C, member 1.
      
 0.471
LOC103459210
Decorin; May affect the rate of fibrils formation.
     
 0.449
galnt17
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.