STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469230Chromobox homolog 8a (Pc class homolog, Drosophila). (343 aa)    
Predicted Functional Partners:
rnf2
Ring finger protein 2.
    
 0.877
RING1
Ring finger protein 1.
    
 0.877
Phc1
Uncharacterized protein.
    
 0.870
PCGF2
Polycomb group ring finger 2.
    
 0.866
ENSPREP00000022294
Bmi1 polycomb ring finger oncogene 1a.
    
 0.866
cbx4
Chromobox 4.
    
0.805
LOC103469229
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
0.805
LOC103481889
Chromo domain-containing protein.
    
0.799
eed
Embryonic ectoderm development.
    
 0.755
cbx2
Chromobox homolog 2 (Drosophila Pc class).
     
0.738
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.