STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC35F5Solute carrier family 35 member F5. (549 aa)    
Predicted Functional Partners:
ENSPREP00000031837
Solute carrier family 35 member G2b.
      
 0.547
slc22a15
Solute carrier family 22 member 15.
    
 
 0.541
RAB7A
RAB7A, member RAS oncogene family.
 
      0.490
LOC103465062
RAB7a, member RAS oncogene family.
 
      0.485
stoml2
Stomatin (EPB72)-like 2.
      
 0.440
slc35b4
Solute carrier family 35 member B4.
      
 0.422
slc10a7
Solute carrier family 10 member 7.
      
 0.420
slc39a13
Solute carrier family 39 member 13.
   
  
 0.415
slc35g2
Uncharacterized protein.
      
 0.404
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.